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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
UVM cis rs8141797 1 rs8138799 chr22:24556902 SUSD2 chr22:24577444-24585074:+ 0.99 4.72 1.67E-5 Amyotrophic lateral sclerosis
UVM cis rs8141797 1 rs8141797 chr22:24582041 SUSD2 chr22:24577444-24585074:+ -0.99 -4.72 1.67E-5 Amyotrophic lateral sclerosis
UVM cis rs703842 1 rs8181644 chr12:58173466 TSFM chr12:58176536-58191367:+ -0.57 -5.04 5.32E-6 Multiple sclerosis
UVM cis rs10461617 1 rs832551 chr5:56180112 C5orf35 chr5:56205103-56213010:+ 0.95 6.34 4.59E-8 Type 2 diabetes
UVM cis rs10461617 1 rs832553 chr5:56114786 C5orf35 chr5:56205103-56213010:+ 0.95 6.34 4.59E-8 Type 2 diabetes
UVM cis rs10461617 1 rs832554 chr5:56115036 C5orf35 chr5:56205103-56213010:+ 1.05 6.59 1.79E-8 Type 2 diabetes
UVM cis rs10461617 1 rs832565 chr5:56150803 C5orf35 chr5:56205103-56213010:+ 0.95 6.34 4.59E-8 Type 2 diabetes
UVM cis rs10461617 1 rs832568 chr5:56153776 C5orf35 chr5:56205103-56213010:+ 0.95 6.34 4.59E-8 Type 2 diabetes
UVM cis rs10461617 1 rs832569 chr5:56154584 C5orf35 chr5:56205103-56213010:+ 0.95 6.34 4.59E-8 Type 2 diabetes
UVM cis rs10461617 1 rs832578 chr5:56164223 C5orf35 chr5:56205103-56213010:+ 0.95 6.93 4.86E-9 Type 2 diabetes
UVM cis rs10461617 1 rs832582 chr5:56177743 C5orf35 chr5:56205103-56213010:+ 0.9 5.67 5.41E-7 Type 2 diabetes
UVM cis rs10461617 1 rs832583 chr5:56178217 C5orf35 chr5:56205103-56213010:+ 0.9 5.67 5.41E-7 Type 2 diabetes
UVM cis rs10461617 1 rs832584 chr5:56179212 C5orf35 chr5:56205103-56213010:+ -0.95 -6.34 4.59E-8 Type 2 diabetes
UVM cis rs10461617 1 rs860580 chr5:56149429 C5orf35 chr5:56205103-56213010:+ -0.95 -6.34 4.59E-8 Type 2 diabetes
UVM cis rs10461617 1 rs861283 chr5:56184610 C5orf35 chr5:56205103-56213010:+ 0.95 6.34 4.59E-8 Type 2 diabetes